A winning combination of small-town hospitality and cosmopolitan attractions, Rochester, Minnesota, is a surprising destination steeped in charm. This city is the third-largest in the state, and home to the world-renowned Mayo Clinic, as well as beautiful parks, a thriving arts scene, and a lively downtown. Catch a ride on the Rochester Trolley to discover the city’s brilliant history, then hop off to visit attractions such as Mayowood Mansion and the Plummer Building. Enjoy the exhibits at Rochester Arts Center, or explore the scenery of Silver Lake or Quarry Hill Nature Center. After a busy day strolling along the skywalks at Shops at University Square, stop for a glass of local wine or go on a microbrewery tour. If you’re in need of some rest and relaxation, these hotel rooms have got you covered. Read the list below for the top hotels with in-room hot tub in Rochester, Minnesota.
We handpicked these listings carefully, considering (wherever possible) recent guest reviews, location, accommodation type, prices, availability of dates, decor, and access to hot tub. The image galleries get refreshed with the latest updates regularly. They were last updated on August 30, 2025.
1. Courtyard by Marriott Mayo Clinic Area/Saint Mary's (from USD 161)
Courtyard by Marriott Mayo Clinic Area/Saint Mary’s is a cosmopolitan accommodation with stylish rooms and comfortable guest services. This hotel is pet friendly and modern and is located across the street from Saint Mary’s Hospital. The spacious rooms are bright and chic and include a microwave, a mini-fridge, a work desk, and cable television with streaming service access. Some rooms also have a balcony and an in-room hot tub. Guests can also relax in the indoor swimming pool and hot tub, work out in the fitness center, or enjoy a drink at the on-site restaurant and bar. The hotel also offers a 24-hour market and a parking garage for a daily fee.
Courtyard Rochester Mayo Clinic Area/Saint Marys
Address: 161 13th Avenue South West
1.82 km (1.2 mi) from Three Links Park
2. GuestHouse Inn & Suites Rochester (from USD 80)
Breakfast offers a good variety, but some areas need improvement in terms of cleanliness and options.
Affordable pricing with free parking and shuttle to Mayo Clinic.
Excellent location near Mayo Clinic and local stores, though the surroundings could be improved.
Amenities include a clean pool, friendly staff, and a convenient attached restaurant.
This contemporary property offers modern rooms and convenient guest amenities. All of the rooms at GuestHouse International Inn & Suites Rochester include free Wi-Fi and feature a microwave and a mini-fridge. Some suites also come with an in-room hot tub for luxurious relaxation. There is also a public hot tub and indoor swimming pool with a child-friendly “waterfall” on site. The hotel offers a complimentary hot breakfast, while the on-site Famous Dave’s Bar-B-Que restaurant provides room service dining. GuestHouse International Inn & Suites Rochester is situated close to Mayo Clinic, and special Mayo Clinic rates are offered as well as a shuttle service to the hospital.
Med City Inn & Suites Rochester Mayo Clinic Area This is a Proud Certified property where you can be extra sure of a welcoming stay.
Address: 435 16th Avenue Northwest
2.64 km (1.7 mi) from Three Links Park
3. Best Western Rochester Hotel Mayo Clinic Area/ St. Mary's (from USD 98)
Located off Route 52, Best Western Rochester Hotel Mayo Clinic Area/ St. Mary’s is a modern property offering plenty of amenities and wonderful facilities. The guest rooms are sleek and contemporary and include a coffee maker, a cable television, and a work desk. There are a variety of rooms and suites available, including a specialty suite with an in-room hot tub. The hotel offers a daily continental breakfast, and the on-site restaurant, Teresa’s Café and Grill, serves American cuisine. Guests also have access to a fitness center, a games area, a hot tub, and an indoor swimming pool with a children-friendly area and a water slide. Free parking is available on site.
Best Western Rochester Hotel Mayo Clinic Area/ St. Mary's
Address: 1517 16th St Sw Rochester, MN 55902
4.07 km (2.6 mi) from Three Links Park
4. The Towers at The Kahler Grand (from USD 599)
Enjoy a luxurious stay at this beautiful hotel. The Towers at The Kahler Grand offers sophisticated rooms, luxe amenities, and a convenient location connected to Mayo Clinic. The rooms feature a flat-screen television and a refrigerator. Honeymoon suites and hot tub suites are available here too. There is also a fitness center and a rooftop indoor swimming pool and a hot tub. A complimentary breakfast is provided, and the elegant lounge hosts an afternoon tea service and evening cocktail hour.
The Towers at The Kahler Grand
Address: 20 Second Avenue Southwest
1.44 km (0.9 mi) from Three Links Park
Rest and relaxation in Rochester
With historic landmarks, lush parks, and a vibrant downtown to explore, Rochester is an engaging and energetic destination. There’s something for everyone to enjoy in this charismatic city, but these hotels make it easy to relax as well. Enjoy these luxurious hotels with in-room hot tub next time you visit Rochester, Minnesota.
History
Get Trip101 in your inbox
Unsubscribe in one click. See our Privacy Policy for more information on how we use your data